Data and R code supporting "A hidden Markov model for ecosystems exhibiting alternative stable states"

Detailed descriptions for each of the files can be found in README.txt. We recommend using RStudio to run the code. Once all files are downloaded to a single directory, double-click on 'HMM.Rproj' to open up a new RStudio window, and the working directory will automatically be set to the folder where the project files are located.