Responses of soil microbial communities to a short-term application of seaweed fertilizer revealed by deep amplicon sequencing

Abstract Numerous studies have reported soil damage from chemical fertilizer application and an obvious promotional effect of seaweed fertilizer fermented with Sargassum horneri on the growth of tomato roots and seedlings due to its alginate oligosaccharide. However, few studies have assessed the effects of the fermented seaweed fertilizer on ecological environment and microorganisms in soil. Herein, our objective is to uncover microbial and soil environmental responses to Sargassum horneri -fermented seaweed fertilizer. After treated tomato-planting plots with Sargassum horneri fermented seaweed fertilizer, soil bacterial community compositions based on 16S rRNA gene amplicon sequencing, enzyme activities in soil and crop yield were analyzed. The bacterial α-diversity was strongly influenced by seaweed fertilizer amendment after 60 days. Non-metric multidimensional scaling (NMDS) analysis showed that a difference in bacterial community compositions between day 0 and day 60 was obvious for soil treated with seaweed fertilizer. The community variation could be caused by invertase activity and dehydrogenase activity in canonical correlation analysis (CCA). Protease activity, polyphenol oxidase activity and urease activity showed an obvious correlation with community variation in the Mantel test. The fertilization increased tomato yield by 1.48–1.83 times, Vc content by 1.24–4.55 times and lycopene content by 1.20–2.33 times. In the present study, a possible reason for bacterial community variation was discovered, which will provide an economical dilution rate of seaweed fertilizer for optimal crop yield and quality. Meanwhile, our study will be beneficial for developing a possible substitute for chemical fertilizer and an improved understanding of soil microbial functions and soil sustainability.