NanoDJ: a Dockerized Jupyter notebook for interactive Oxford Nanopore MinION sequence manipulation and genome assembly

Hector Rodriguez-Perez,Tamara Hernández-Beeftink,José M. Lorenzo-Salazar,José L. Roda-García,Carlos J. Pérez-González,Marcos Colebrook,Carlos Flores

NanoDJ: a Dockerized Jupyter notebook for interactive Oxford Nanopore MinION sequence manipulation and genome assembly

2019

Hector Rodriguez-Perez
Tamara Hernández-Beeftink
José M. Lorenzo-Salazar
José L. Roda-García
Carlos J. Pérez-González
Marcos Colebrook
Carlos Flores

Background The Oxford Nanopore Technologies (ONT) MinION portable sequencer makes it possible to use cutting-edge genomic technologies in the field and the academic classroom.

Keywords:

Nanopore sequencing
Genetics
Sequence assembly
Computational biology
Biology
Minion
Nanopore
Genomics

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